It is highly recommended to *ONLY* do your control panel updates from the shell, whilst you are watching the screen.
Updating using the web-scripts is prone to failure, and dependant on YOUR connectivity to the internet.
You should *NEVER* just switch on automatic updates and hope for the best - letting someone else decide what and when to update your system, will lead to downtime.
# bring all cpanel scripts up to date
- /scripts/updatenow
- /scripts/upcp ---force
- /scripts/mysqlup --force
- /scripts/exim4 --force
- /scripts/fixeverything
Finally restart the Cpanel/WHM process with
- /etc/init.d/cpanel restart